Example Gene Lists with Overlaps — gene

A synthetic dataset of three gene lists, created from the first 250 human gene symbols in org.Hs.eg.db.

Usage

gene_list

Format

A named list of length 3. Each element is a character vector of gene symbols:

random_genes_A: 125 gene symbols.
random_genes_B: 115 gene symbols.
random_genes_C: 70 gene symbols.

Source

Generated from org.Hs.eg.db (keys of type SYMBOL), using a reproducible random seed.

Examples

data(gene_list)

# Inspect the list
str(gene_list)
#> List of 3
#>  $ random_genes_A: chr [1:125] "ALPP" "ACTG1P9" "AHSG" "ASIC2" ...
#>  $ random_genes_B: chr [1:115] "AFM" "ADPRH" "AIF1" "ACVR2A" ...
#>  $ random_genes_C: chr [1:70] "ACTN1" "ALDOA" "CRYBG1" "AK4" ...

# Compute overlaps and plot
ov <- computeOverlaps(gene_list)
plotVenn(ov)